What's different

It is nice to hear that whatever event caused the mother board capacitors to swell up most likely did not damage your primary card.

There is a feature in the SETUP32 program that will allow you to upload, download and save burned parameters to disk. This software essentially backs up and restores a controller. For newer controllers, you could use GalilSuite to provide this functionality. The SETUP32 software can be found at the following link.
http://www.galil.com/downloads/software

Best,